BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005G01LP1|AL425414
(1008 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1138 1142 0.0
>3x_Contig1138
Length = 5524
Score = 1142 bits (553), Expect = 0.0
Identities = 837/973 (86%), Gaps = 3/973 (0%)
Strand = Plus / Plus
Query: 38 gaaaccacgacgaabggaaccacgagaggccaacggaggacgacagastaaaagcgbgaa 97
||||| ||||| || ||||| |||||| || |||| ||||||||||| |||||| | |||
Sbjct: 2146 gaaactacgactaatggaactacgagatgctaacgtaggacgacagagtaaaag-gtgaa 2204
Query: 98 aggagcctgtcaaatbakgkmaaactgccakatatgtmcaggacstgtgaa-caagcatg 156
|||||| ||| |||| | | ||| ||| | |||||| |||||| |||||| ||||||||
Sbjct: 2205 aggagcttgttaaattatgtaaaattgctatatatgtacaggacttgtgaaacaagcatg 2264
Query: 157 tsttttttttaatggaaaggkcagasaccaatatcagabcaacgcctaacccagggaggc 216
| |||||||||||||||||| |||| || ||||||||| |||||| ||||||||| ||||
Sbjct: 2265 tgttttttttaatggaaaggtcagagactaatatcagatcaacgcttaacccaggtaggc 2324
Query: 217 atcyttcttgcctttcccttaccaggcctccytctttccmcgtgtctstmatcccctgnc 276
||| |||||||||||| |||||||||| || |||||| ||||||| | ||| | || |
Sbjct: 2325 atctttcttgcctttctcttaccaggcttctttctttcgacgtgtctgtaatctcttgtc 2384
Query: 277 aagacaccggabccatgcmatccagtgkkcaabagksgggkgamagcmaccaatgcctta 336
||||||||||| | |||| ||| ||| ||| || || || ||| ||||||||||||
Sbjct: 2385 aagacaccggatctatgcaatctagttttcaatagtgggttgaaagcaaccaatgcctta 2444
Query: 337 ccgabtgcatgcatcaaggcatcggcctgccccstaataccaccyccggaaaccattgcm 396
|||| ||||||||||||||||||||| |||||| |||||||||| ||||||||||||||
Sbjct: 2445 ccgattgcatgcatcaaggcatcggcttgccccgtaataccacctccggaaaccattgca 2504
Query: 397 aagacgtcataykygccaacacygtcaatggcttttaayggatacantacggantccccg 456
||||||| ||| |||||||| ||||||||||||||| ||||||| |||||| || | |
Sbjct: 2505 aagacgttatatttgccaacactgtcaatggcttttaatggatacattacggattctctg 2564
Query: 457 nccctcanntnaacgaagnaancgnnnaanngacggncgncaactaasabcytaccttca 516
|| ||| | ||||||| || || || ||||| || |||||| | | ||||||||
Sbjct: 2565 tccttcattttaacgaagtaatcgtttaattgacggtcgttaactaagatcttaccttca 2624
Query: 517 ccacgaaccacatataccttggcagcagagggccttcctcctccgacggccaaacttcca 576
||||||||||||||||||||||||| ||||| | ||| || ||||| ||||||||||| |
Sbjct: 2625 ccacgaaccacatataccttggcagtagaggtctttcttcttccgatggccaaacttcta 2684
Query: 577 ccaaactcggccaactgcctcamaggatctccytgagggtgcmacctcggcctcctacgg 636
||||||||| | || ||| ||| || ||||| ||||| ||| || ||| | || || ||
Sbjct: 2685 ccaaactcgtctaattgcttcaaagtatctctttgaggttgcaacttcgtcttcttatgg 2744
Query: 637 gagttcgcgaaastgtgcgamagcgcatcgggaaccaactgtggatcaatagaattcaaa 696
| ||||| ||| ||| ||| | | |||||| ||||||||||||||||||||||||||||
Sbjct: 2745 tatttcgctaaagtgttcgaaatctcatcggtaaccaactgtggatcaatagaattcaaa 2804
Query: 697 cggttcaacatgaacaaaagctgcttatactgggtagatttcaaacgggacccaccacct 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2805 cggttcaacatgaacaaaagctgcttatactgggtagatttcaaacgggacccaccacct 2864
Query: 757 attagagcgtactcttgcaaactcaaccaggaaggcctttcttccacttggacggkagga 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2865 attagagcgtactcttgcaaactcaaccaggaaggcctttcttccacttggacggtagga 2924
Query: 817 katttgakatatktcctcaacaacgcttctaagtkatcgatatgagcttcgkgatgkggg 876
|||||| |||| ||||||||||||||||||||| |||||||||||||||| |||| |||
Sbjct: 2925 tatttgatatatttcctcaacaacgcttctaagttatcgatatgagcttcgtgatgtggg 2984
Query: 877 ktggcggagtaaaaagtagacaacttaggcacaattctaktccctktkttaccatattct 936
|||||||||||||||||||||||||||||||||||||| ||||| | | ||||||||||
Sbjct: 2985 ttggcggagtaaaaagtagacaacttaggcacaattctagtccctgtgtaaccatattct 3044
Query: 937 kcaccakcwcgggcgccatcattgtactgccttgaaccagaaccggkcctctcaga-ccc 995
||||| | ||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 3045 gcaccagcacgggcgccatcattgtactgccttgaaccagaaccggtcctctcagacccc 3104
Query: 996 gagctgttaaaca 1008
|||||||||||||
Sbjct: 3105 gagctgttaaaca 3117
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.43 0.719 1.35
Gapped
Lambda K H
1.43 0.719 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2371
Number of Sequences: 1807
Number of extensions: 2371
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 1008
length of database: 10,358,551
effective HSP length: 16
effective length of query: 992
effective length of database: 10,329,639
effective search space: 10247001888
effective search space used: 10247001888
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.9 bits)
S1: 11 (23.2 bits)
S2: 49 (101.7 bits)